NDDVD - Neurodegenerative Diseases Variation Database
GCH1 (GTP cyclohydrolase 1)
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Curator:
Y Yang
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View all diseases associated with gene GCH1
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All screenings for gene GCH1
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
Template
: Template(s) used to detect the sequence variant; DNA = genomic DNA, RNA = RNA (cDNA).
All options:
DNA
RNA = RNA (cDNA)
Protein
? = unknown
Technique
: Technique(s) used to identify the sequence variant.
All options:
? = Unknown
arrayCGH = array for Comparative Genomic Hybridisation
arraySEQ = array for resequencing
arraySNP = array for SNP typing
arrayCNV = array for Copy Number Variation (SNP and CNV probes)
BESS = Base Excision Sequence Scanning
CMC = Chemical Mismatch Cleavage
CSCE = Conformation Sensitive Capillary Electrophoresis
DGGE = Denaturing-Gradient Gel-Electrophoresis
DHPLC = Denaturing High-Performance Liquid Chromatography
DOVAM = Detection Of Virtually All Mutations (SSCA variant)
ddF = dideoxy Fingerprinting
DSCA = Double-Strand DNA Conformation Analysis
EMC = Enzymatic Mismatch Cleavage
HD = HeteroDuplex analysis
MCA = high-resolution Melting Curve Analysis (hrMCA)
IHC = Immuno-Histo-Chemistry
MAPH = Multiplex Amplifiable Probe Hybridisation
MLPA = Multiplex Ligation-dependent Probe Amplification
SEQ-NG = Next-Generation Sequencing
SEQ-NG-H = Next-Generation Sequencing - Helicos
SEQ-NG-I = Next-Generation Sequencing - Illumina/Solexa
SEQ-NG-R = Next-Generation Sequencing - Roche/454
SEQ-NG-S = Next-Generation Sequencing - SOLiD
Northern = Northern blotting
PCR = Polymerase Chain Reaction
PCRdig = PCR + restriction enzyme digestion
PCRlr = PCR, long-range
PCRm = PCR, multiplex
PCRq = PCR, quantitative
PAGE = Poly-Acrylamide Gel-Electrophoresis
PTT = Protein Truncation Test
PFGE = Pulsed-Field Gel-Electrophoresis (+Southern)
RT-PCR = Reverse Transcription and PCR
SEQ = SEQuencing
SBE = Single Base Extension
SSCA = Single-Strand DNA Conformation polymorphism Analysis (SSCP)
SSCAf = SSCA, fluorescent (SSCP)
Southern = Southern blotting
TaqMan = TaqMan assay
Western = Western Blotting
How to query this table
All list views have search fields which can be used to search data. You can search for a complete word or you can search for a part of a search term. If you enclose two or more words in double quotes, LOVD will search for the combination of those words only exactly in the order you specify. Note that search terms are case-insensitive and that wildcards such as * are treated as normal text! For all options, like "and", "or", and "not" searches, or searching for prefixes or suffixes, see the table below.
Operator
Column type
Example
Matches
Text
Arg
all entries containing 'Arg'
space
Text
Arg Ser
all entries containing 'Arg' and 'Ser'
|
Text
Arg|Ser
all entries containing 'Arg' or 'Ser'
!
Text
!fs
all entries not containing 'fs'
^
Text
^p.(Arg
all entries beginning with 'p.(Arg'
$
Text
Ser)$
all entries ending with 'Ser)'
=""
Text
=""
all entries with this field empty
=""
Text
="p.0"
all entries exactly matching 'p.0'
!=""
Text
!=""
all entries with this field not empty
!=""
Text
!="p.0"
all entries not exactly matching 'p.0?'
combination
Text
*|Ter !fs
all entries containing '*' or 'Ter' but not containing 'fs'
Date
2020
all entries matching the year 2020
|
Date
2020-03|2020-04
all entries matching March or April, 2020
!
Date
!2020-03
all entries not matching March, 2020
<
Date
<2020
all entries before the year 2020
<=
Date
<=2020-06
all entries in or before June, 2020
>
Date
>2020-06
all entries after June, 2020
>=
Date
>=2020-06-15
all entries on or after June 15th, 2020
combination
Date
2019|2020 <2020-03
all entries in 2019 or 2020, and before March, 2020
Numeric
23
all entries exactly matching 23
|
Numeric
23|24
all entries exactly matching 23 or 24
!
Numeric
!23
all entries not exactly matching 23
<
Numeric
<23
all entries lower than 23
<=
Numeric
<=23
all entries lower than, or equal to, 23
>
Numeric
>23
all entries higher than 23
>=
Numeric
>=23
all entries higher than, or equal to, 23
combination
Numeric
>=20 <30 !23
all entries with values from 20 to 29, but not equal to 23
Some more advanced examples:
Example
Matches
Asian
all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian
all entries containing 'Asian' but not containing 'Caucasian'
Asian|African !Caucasian
all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"
all entries containing 'South Asian', but not containing 'South East Asian'
To sort on a certain column, click on the column header or on the arrows. If that column is already selected to sort on, the sort order will be swapped. The column currently sorted on has a darker blue background color than the other columns. The up and down arrows next to the column name indicate the current sorting direction. When sorting on any field other than the default, LOVD will sort secondarily on the default sort column.
74 entries on 1 page. Showing entries 1 - 74.
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Legend
How to query
Screening ID
Individual ID
Template
Technique
Variants found
Owner
0000001047
00001047
?
?
1
Y Yang
0000001048
00001048
?
?
1
Y Yang
0000001049
00001049
?
?
1
Y Yang
0000001050
00001050
?
?
1
Y Yang
0000001051
00001051
?
?
1
Y Yang
0000001052
00001052
?
?
1
Y Yang
0000001053
00001053
?
?
1
Y Yang
0000001054
00001054
?
?
1
Y Yang
0000001055
00001055
?
?
1
Y Yang
0000001056
00001056
?
?
1
Y Yang
0000001057
00001057
?
?
1
Y Yang
0000001058
00001058
?
?
1
Y Yang
0000001059
00001059
?
?
1
Y Yang
0000001060
00001060
?
?
1
Y Yang
0000001061
00001061
?
?
1
Y Yang
0000001062
00001062
?
?
1
Y Yang
0000001063
00001063
?
?
1
Y Yang
0000001064
00001064
?
?
1
Y Yang
0000001065
00001065
?
?
1
Y Yang
0000001066
00001066
?
?
1
Y Yang
0000001067
00001067
?
?
1
Y Yang
0000001068
00001068
?
?
1
Y Yang
0000001069
00001069
?
?
1
Y Yang
0000001070
00001070
?
?
1
Y Yang
0000001071
00001071
?
?
1
Y Yang
0000001072
00001072
?
?
1
Y Yang
0000001073
00001073
?
?
1
Y Yang
0000001074
00001074
?
?
1
Y Yang
0000001075
00001075
?
?
1
Y Yang
0000001076
00001076
?
?
1
Y Yang
0000001077
00001077
?
?
1
Y Yang
0000001078
00001078
?
?
1
Y Yang
0000001079
00001079
?
?
1
Y Yang
0000001080
00001080
?
?
1
Y Yang
0000001081
00001081
?
?
1
Y Yang
0000001082
00001082
?
?
1
Y Yang
0000001083
00001083
?
?
1
Y Yang
0000001084
00001084
?
?
1
Y Yang
0000001085
00001085
?
?
1
Y Yang
0000001086
00001086
?
?
1
Y Yang
0000001087
00001087
?
?
1
Y Yang
0000001088
00001088
?
?
1
Y Yang
0000001089
00001089
?
?
1
Y Yang
0000001090
00001090
?
?
1
Y Yang
0000001091
00001091
?
?
1
Y Yang
0000001092
00001092
?
?
1
Y Yang
0000001093
00001093
?
?
1
Y Yang
0000001094
00001094
?
?
1
Y Yang
0000001095
00001095
?
?
1
Y Yang
0000001096
00001096
?
?
1
Y Yang
0000001097
00001097
?
?
1
Y Yang
0000001098
00001098
?
?
1
Y Yang
0000001099
00001099
?
?
1
Y Yang
0000001155
00001155
?
?
1
Y Yang
0000001156
00001156
?
?
1
Y Yang
0000001157
00001157
?
?
1
Y Yang
0000001158
00001158
?
?
1
Y Yang
0000001159
00001159
?
?
1
Y Yang
0000001160
00001160
?
?
1
Y Yang
0000001161
00001161
?
?
1
Y Yang
0000001162
00001162
?
?
1
Y Yang
0000001163
00001163
?
?
1
Y Yang
0000001164
00001164
?
?
1
Y Yang
0000001165
00001165
?
?
1
Y Yang
0000001166
00001166
?
?
1
Y Yang
0000001167
00001167
?
?
1
Y Yang
0000001168
00001168
?
?
1
Y Yang
0000001169
00001169
?
?
1
Y Yang
0000001183
00001183
?
?
1
Y Yang
0000001184
00001184
?
?
1
Y Yang
0000001185
00001185
?
?
1
Y Yang
0000001186
00001186
?
?
1
Y Yang
0000001187
00001187
?
?
1
Y Yang
0000001188
00001188
?
?
1
Y Yang
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