NDDVD - Neurodegenerative Diseases Variation Database
GRN (granulin)
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Curator:
Y Yang
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View GRN gene homepage
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View all transcripts of gene GRN
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View all variants affecting transcripts
View unique variants in gene GRN
View all variants in gene GRN
Full data view for gene GRN
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View all individuals with variants in gene GRN
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View all diseases associated with gene GRN
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View available phenotype columns
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View all screenings for gene GRN
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All screenings for gene GRN
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
Template
: Template(s) used to detect the sequence variant; DNA = genomic DNA, RNA = RNA (cDNA).
All options:
DNA
RNA = RNA (cDNA)
Protein
? = unknown
Technique
: Technique(s) used to identify the sequence variant.
All options:
? = Unknown
arrayCGH = array for Comparative Genomic Hybridisation
arraySEQ = array for resequencing
arraySNP = array for SNP typing
arrayCNV = array for Copy Number Variation (SNP and CNV probes)
BESS = Base Excision Sequence Scanning
CMC = Chemical Mismatch Cleavage
CSCE = Conformation Sensitive Capillary Electrophoresis
DGGE = Denaturing-Gradient Gel-Electrophoresis
DHPLC = Denaturing High-Performance Liquid Chromatography
DOVAM = Detection Of Virtually All Mutations (SSCA variant)
ddF = dideoxy Fingerprinting
DSCA = Double-Strand DNA Conformation Analysis
EMC = Enzymatic Mismatch Cleavage
HD = HeteroDuplex analysis
MCA = high-resolution Melting Curve Analysis (hrMCA)
IHC = Immuno-Histo-Chemistry
MAPH = Multiplex Amplifiable Probe Hybridisation
MLPA = Multiplex Ligation-dependent Probe Amplification
SEQ-NG = Next-Generation Sequencing
SEQ-NG-H = Next-Generation Sequencing - Helicos
SEQ-NG-I = Next-Generation Sequencing - Illumina/Solexa
SEQ-NG-R = Next-Generation Sequencing - Roche/454
SEQ-NG-S = Next-Generation Sequencing - SOLiD
Northern = Northern blotting
PCR = Polymerase Chain Reaction
PCRdig = PCR + restriction enzyme digestion
PCRlr = PCR, long-range
PCRm = PCR, multiplex
PCRq = PCR, quantitative
PAGE = Poly-Acrylamide Gel-Electrophoresis
PTT = Protein Truncation Test
PFGE = Pulsed-Field Gel-Electrophoresis (+Southern)
RT-PCR = Reverse Transcription and PCR
SEQ = SEQuencing
SBE = Single Base Extension
SSCA = Single-Strand DNA Conformation polymorphism Analysis (SSCP)
SSCAf = SSCA, fluorescent (SSCP)
Southern = Southern blotting
TaqMan = TaqMan assay
Western = Western Blotting
How to query this table
All list views have search fields which can be used to search data. You can search for a complete word or you can search for a part of a search term. If you enclose two or more words in double quotes, LOVD will search for the combination of those words only exactly in the order you specify. Note that search terms are case-insensitive and that wildcards such as * are treated as normal text! For all options, like "and", "or", and "not" searches, or searching for prefixes or suffixes, see the table below.
Operator
Column type
Example
Matches
Text
Arg
all entries containing 'Arg'
space
Text
Arg Ser
all entries containing 'Arg' and 'Ser'
|
Text
Arg|Ser
all entries containing 'Arg' or 'Ser'
!
Text
!fs
all entries not containing 'fs'
^
Text
^p.(Arg
all entries beginning with 'p.(Arg'
$
Text
Ser)$
all entries ending with 'Ser)'
=""
Text
=""
all entries with this field empty
=""
Text
="p.0"
all entries exactly matching 'p.0'
!=""
Text
!=""
all entries with this field not empty
!=""
Text
!="p.0"
all entries not exactly matching 'p.0?'
combination
Text
*|Ter !fs
all entries containing '*' or 'Ter' but not containing 'fs'
Date
2020
all entries matching the year 2020
|
Date
2020-03|2020-04
all entries matching March or April, 2020
!
Date
!2020-03
all entries not matching March, 2020
<
Date
<2020
all entries before the year 2020
<=
Date
<=2020-06
all entries in or before June, 2020
>
Date
>2020-06
all entries after June, 2020
>=
Date
>=2020-06-15
all entries on or after June 15th, 2020
combination
Date
2019|2020 <2020-03
all entries in 2019 or 2020, and before March, 2020
Numeric
23
all entries exactly matching 23
|
Numeric
23|24
all entries exactly matching 23 or 24
!
Numeric
!23
all entries not exactly matching 23
<
Numeric
<23
all entries lower than 23
<=
Numeric
<=23
all entries lower than, or equal to, 23
>
Numeric
>23
all entries higher than 23
>=
Numeric
>=23
all entries higher than, or equal to, 23
combination
Numeric
>=20 <30 !23
all entries with values from 20 to 29, but not equal to 23
Some more advanced examples:
Example
Matches
Asian
all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian
all entries containing 'Asian' but not containing 'Caucasian'
Asian|African !Caucasian
all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"
all entries containing 'South Asian', but not containing 'South East Asian'
To sort on a certain column, click on the column header or on the arrows. If that column is already selected to sort on, the sort order will be swapped. The column currently sorted on has a darker blue background color than the other columns. The up and down arrows next to the column name indicate the current sorting direction. When sorting on any field other than the default, LOVD will sort secondarily on the default sort column.
99 entries on 1 page. Showing entries 1 - 99.
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Legend
How to query
Screening ID
Individual ID
Template
Technique
Variants found
Owner
0000001348
00001348
?
?
1
Y Yang
0000001349
00001349
?
?
1
Y Yang
0000001350
00001350
?
?
1
Y Yang
0000001351
00001351
?
?
1
Y Yang
0000001352
00001352
?
?
1
Y Yang
0000001353
00001353
?
?
1
Y Yang
0000001354
00001354
?
?
1
Y Yang
0000001355
00001355
?
?
1
Y Yang
0000001356
00001356
?
?
1
Y Yang
0000001357
00001357
?
?
1
Y Yang
0000001358
00001358
?
?
1
Y Yang
0000001359
00001359
?
?
1
Y Yang
0000001360
00001360
?
?
1
Y Yang
0000001361
00001361
?
?
1
Y Yang
0000001362
00001362
?
?
1
Y Yang
0000001363
00001363
?
?
1
Y Yang
0000001364
00001364
?
?
1
Y Yang
0000001365
00001365
?
?
1
Y Yang
0000001366
00001366
?
?
1
Y Yang
0000001367
00001367
?
?
1
Y Yang
0000001368
00001368
?
?
1
Y Yang
0000001369
00001369
?
?
1
Y Yang
0000001370
00001370
?
?
1
Y Yang
0000001371
00001371
?
?
1
Y Yang
0000001372
00001372
?
?
1
Y Yang
0000001373
00001373
?
?
1
Y Yang
0000001374
00001374
?
?
1
Y Yang
0000001375
00001375
?
?
1
Y Yang
0000001376
00001376
?
?
1
Y Yang
0000001377
00001377
?
?
1
Y Yang
0000001378
00001378
?
?
1
Y Yang
0000001379
00001379
?
?
1
Y Yang
0000001380
00001380
?
?
1
Y Yang
0000001381
00001381
?
?
1
Y Yang
0000001382
00001382
?
?
1
Y Yang
0000001383
00001383
?
?
1
Y Yang
0000001384
00001384
?
?
1
Y Yang
0000001385
00001385
?
?
1
Y Yang
0000001386
00001386
?
?
1
Y Yang
0000001387
00001387
?
?
1
Y Yang
0000001388
00001388
?
?
1
Y Yang
0000001389
00001389
?
?
1
Y Yang
0000001390
00001390
?
?
1
Y Yang
0000001391
00001391
?
?
1
Y Yang
0000001392
00001392
?
?
1
Y Yang
0000001393
00001393
?
?
1
Y Yang
0000001394
00001394
?
?
1
Y Yang
0000001395
00001395
?
?
1
Y Yang
0000001396
00001396
?
?
1
Y Yang
0000001397
00001397
?
?
1
Y Yang
0000001398
00001398
?
?
1
Y Yang
0000001399
00001399
?
?
1
Y Yang
0000001400
00001400
?
?
1
Y Yang
0000001401
00001401
?
?
1
Y Yang
0000001402
00001402
?
?
1
Y Yang
0000001403
00001403
?
?
1
Y Yang
0000001404
00001404
?
?
1
Y Yang
0000001405
00001405
?
?
1
Y Yang
0000001406
00001406
?
?
1
Y Yang
0000001407
00001407
?
?
1
Y Yang
0000001447
00001447
?
?
1
Y Yang
0000001448
00001448
?
?
1
Y Yang
0000001449
00001449
?
?
1
Y Yang
0000001450
00001450
?
?
1
Y Yang
0000001451
00001451
?
?
1
Y Yang
0000001452
00001452
?
?
1
Y Yang
0000001453
00001453
?
?
1
Y Yang
0000001454
00001454
?
?
1
Y Yang
0000001455
00001455
?
?
1
Y Yang
0000001456
00001456
?
?
1
Y Yang
0000001457
00001457
?
?
1
Y Yang
0000001469
00001469
?
?
1
Y Yang
0000001470
00001470
?
?
2
Y Yang
0000005169
00005166
?
?
1
XY Liu
0000005547
00005536
?
?
1
XY Liu
0000005548
00005537
?
?
1
XY Liu
0000005549
00005538
?
?
1
XY Liu
0000005550
00005539
?
?
1
XY Liu
0000005564
00005552
?
?
1
XY Liu
0000005566
00005554
?
?
1
XY Liu
0000005569
00005557
?
?
1
XY Liu
0000006011
00005992
?
?
1
XY Liu
0000006023
00006003
?
?
1
XY Liu
0000006027
00006007
?
?
1
XY Liu
0000006029
00006009
?
?
1
XY Liu
0000006030
00006010
?
?
1
XY Liu
0000006031
00006011
?
?
1
XY Liu
0000006032
00006012
?
?
1
XY Liu
0000006033
00006013
?
?
1
XY Liu
0000006068
00006046
?
?
1
XY Liu
0000006070
00006048
?
?
1
XY Liu
0000006110
00006088
?
?
1
XY Liu
0000006111
00006089
?
?
1
XY Liu
0000006112
00006090
?
?
1
XY Liu
0000006116
00006094
?
?
1
XY Liu
0000006120
00006098
?
?
1
XY Liu
0000006129
00006107
?
?
1
XY Liu
0000006446
00006422
?
?
1
XY Liu
0000006603
00006578
?
?
2
XY Liu
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Legend
How to query
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