NDDVD - Neurodegenerative Diseases Variation Database
HPRT1 (hypoxanthine phosphoribosyltransferase 1)
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Curator:
Y Yang
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View all transcripts of gene HPRT1
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View all variants affecting transcripts
View unique variants in gene HPRT1
View all variants in gene HPRT1
Full data view for gene HPRT1
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View all individuals with variants in gene HPRT1
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View all diseases associated with gene HPRT1
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View available phenotype columns
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View all screenings for gene HPRT1
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All screenings for gene HPRT1
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
Template
: Template(s) used to detect the sequence variant; DNA = genomic DNA, RNA = RNA (cDNA).
All options:
DNA
RNA = RNA (cDNA)
Protein
? = unknown
Technique
: Technique(s) used to identify the sequence variant.
All options:
? = Unknown
arrayCGH = array for Comparative Genomic Hybridisation
arraySEQ = array for resequencing
arraySNP = array for SNP typing
arrayCNV = array for Copy Number Variation (SNP and CNV probes)
BESS = Base Excision Sequence Scanning
CMC = Chemical Mismatch Cleavage
CSCE = Conformation Sensitive Capillary Electrophoresis
DGGE = Denaturing-Gradient Gel-Electrophoresis
DHPLC = Denaturing High-Performance Liquid Chromatography
DOVAM = Detection Of Virtually All Mutations (SSCA variant)
ddF = dideoxy Fingerprinting
DSCA = Double-Strand DNA Conformation Analysis
EMC = Enzymatic Mismatch Cleavage
HD = HeteroDuplex analysis
MCA = high-resolution Melting Curve Analysis (hrMCA)
IHC = Immuno-Histo-Chemistry
MAPH = Multiplex Amplifiable Probe Hybridisation
MLPA = Multiplex Ligation-dependent Probe Amplification
SEQ-NG = Next-Generation Sequencing
SEQ-NG-H = Next-Generation Sequencing - Helicos
SEQ-NG-I = Next-Generation Sequencing - Illumina/Solexa
SEQ-NG-R = Next-Generation Sequencing - Roche/454
SEQ-NG-S = Next-Generation Sequencing - SOLiD
Northern = Northern blotting
PCR = Polymerase Chain Reaction
PCRdig = PCR + restriction enzyme digestion
PCRlr = PCR, long-range
PCRm = PCR, multiplex
PCRq = PCR, quantitative
PAGE = Poly-Acrylamide Gel-Electrophoresis
PTT = Protein Truncation Test
PFGE = Pulsed-Field Gel-Electrophoresis (+Southern)
RT-PCR = Reverse Transcription and PCR
SEQ = SEQuencing
SBE = Single Base Extension
SSCA = Single-Strand DNA Conformation polymorphism Analysis (SSCP)
SSCAf = SSCA, fluorescent (SSCP)
Southern = Southern blotting
TaqMan = TaqMan assay
Western = Western Blotting
How to query this table
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Operator
Column type
Example
Matches
Text
Arg
all entries containing 'Arg'
space
Text
Arg Ser
all entries containing 'Arg' and 'Ser'
|
Text
Arg|Ser
all entries containing 'Arg' or 'Ser'
!
Text
!fs
all entries not containing 'fs'
^
Text
^p.(Arg
all entries beginning with 'p.(Arg'
$
Text
Ser)$
all entries ending with 'Ser)'
=""
Text
=""
all entries with this field empty
=""
Text
="p.0"
all entries exactly matching 'p.0'
!=""
Text
!=""
all entries with this field not empty
!=""
Text
!="p.0"
all entries not exactly matching 'p.0?'
combination
Text
*|Ter !fs
all entries containing '*' or 'Ter' but not containing 'fs'
Date
2020
all entries matching the year 2020
|
Date
2020-03|2020-04
all entries matching March or April, 2020
!
Date
!2020-03
all entries not matching March, 2020
<
Date
<2020
all entries before the year 2020
<=
Date
<=2020-06
all entries in or before June, 2020
>
Date
>2020-06
all entries after June, 2020
>=
Date
>=2020-06-15
all entries on or after June 15th, 2020
combination
Date
2019|2020 <2020-03
all entries in 2019 or 2020, and before March, 2020
Numeric
23
all entries exactly matching 23
|
Numeric
23|24
all entries exactly matching 23 or 24
!
Numeric
!23
all entries not exactly matching 23
<
Numeric
<23
all entries lower than 23
<=
Numeric
<=23
all entries lower than, or equal to, 23
>
Numeric
>23
all entries higher than 23
>=
Numeric
>=23
all entries higher than, or equal to, 23
combination
Numeric
>=20 <30 !23
all entries with values from 20 to 29, but not equal to 23
Some more advanced examples:
Example
Matches
Asian
all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian
all entries containing 'Asian' but not containing 'Caucasian'
Asian|African !Caucasian
all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"
all entries containing 'South Asian', but not containing 'South East Asian'
To sort on a certain column, click on the column header or on the arrows. If that column is already selected to sort on, the sort order will be swapped. The column currently sorted on has a darker blue background color than the other columns. The up and down arrows next to the column name indicate the current sorting direction. When sorting on any field other than the default, LOVD will sort secondarily on the default sort column.
173 entries on 2 pages. Showing entries 1 - 100.
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Legend
How to query
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Screening ID
Individual ID
Template
Technique
Variants found
Owner
0000002043
00002043
?
?
1
Y Yang
0000002044
00002044
?
?
1
Y Yang
0000002045
00002045
?
?
1
Y Yang
0000002046
00002046
?
?
1
Y Yang
0000002047
00002047
?
?
1
Y Yang
0000002048
00002048
?
?
1
Y Yang
0000002049
00002049
?
?
1
Y Yang
0000002050
00002050
?
?
1
Y Yang
0000002051
00002051
?
?
1
Y Yang
0000002052
00002052
?
?
1
Y Yang
0000002053
00002053
?
?
1
Y Yang
0000002054
00002054
?
?
1
Y Yang
0000002055
00002055
?
?
1
Y Yang
0000002056
00002056
?
?
1
Y Yang
0000002057
00002057
?
?
1
Y Yang
0000002058
00002058
?
?
1
Y Yang
0000002059
00002059
?
?
1
Y Yang
0000002060
00002060
?
?
1
Y Yang
0000002061
00002061
?
?
1
Y Yang
0000002062
00002062
?
?
1
Y Yang
0000002063
00002063
?
?
1
Y Yang
0000002064
00002064
?
?
1
Y Yang
0000002065
00002065
?
?
1
Y Yang
0000002066
00002066
?
?
1
Y Yang
0000002067
00002067
?
?
1
Y Yang
0000002068
00002068
?
?
1
Y Yang
0000002069
00002069
?
?
1
Y Yang
0000002070
00002070
?
?
1
Y Yang
0000002071
00002071
?
?
1
Y Yang
0000002072
00002072
?
?
1
Y Yang
0000002073
00002073
?
?
1
Y Yang
0000002074
00002074
?
?
1
Y Yang
0000002075
00002075
?
?
1
Y Yang
0000002076
00002076
?
?
1
Y Yang
0000002077
00002077
?
?
1
Y Yang
0000002078
00002078
?
?
1
Y Yang
0000002079
00002079
?
?
1
Y Yang
0000002080
00002080
?
?
1
Y Yang
0000002081
00002081
?
?
1
Y Yang
0000002082
00002082
?
?
1
Y Yang
0000002083
00002083
?
?
1
Y Yang
0000002084
00002084
?
?
1
Y Yang
0000002085
00002085
?
?
1
Y Yang
0000002086
00002086
?
?
1
Y Yang
0000002087
00002087
?
?
1
Y Yang
0000002088
00002088
?
?
1
Y Yang
0000002089
00002089
?
?
1
Y Yang
0000002090
00002090
?
?
1
Y Yang
0000002091
00002091
?
?
1
Y Yang
0000002092
00002092
?
?
1
Y Yang
0000002093
00002093
?
?
1
Y Yang
0000002094
00002094
?
?
1
Y Yang
0000002095
00002095
?
?
1
Y Yang
0000002096
00002096
?
?
1
Y Yang
0000002097
00002097
?
?
1
Y Yang
0000002098
00002098
?
?
1
Y Yang
0000002099
00002099
?
?
1
Y Yang
0000002100
00002100
?
?
1
Y Yang
0000002101
00002101
?
?
1
Y Yang
0000002102
00002102
?
?
1
Y Yang
0000002103
00002103
?
?
1
Y Yang
0000002104
00002104
?
?
1
Y Yang
0000002105
00002105
?
?
1
Y Yang
0000002106
00002106
?
?
1
Y Yang
0000002107
00002107
?
?
1
Y Yang
0000002108
00002108
?
?
1
Y Yang
0000002109
00002109
?
?
1
Y Yang
0000002110
00002110
?
?
1
Y Yang
0000002111
00002111
?
?
1
Y Yang
0000002112
00002112
?
?
1
Y Yang
0000002113
00002113
?
?
1
Y Yang
0000002114
00002114
?
?
1
Y Yang
0000002115
00002115
?
?
1
Y Yang
0000002116
00002116
?
?
1
Y Yang
0000002117
00002117
?
?
1
Y Yang
0000002118
00002118
?
?
1
Y Yang
0000002119
00002119
?
?
1
Y Yang
0000002120
00002120
?
?
1
Y Yang
0000002121
00002121
?
?
1
Y Yang
0000002122
00002122
?
?
1
Y Yang
0000002123
00002123
?
?
1
Y Yang
0000002124
00002124
?
?
1
Y Yang
0000002125
00002125
?
?
1
Y Yang
0000002126
00002126
?
?
1
Y Yang
0000002127
00002127
?
?
1
Y Yang
0000002128
00002128
?
?
1
Y Yang
0000002129
00002129
?
?
1
Y Yang
0000002130
00002130
?
?
1
Y Yang
0000002131
00002131
?
?
1
Y Yang
0000002132
00002132
?
?
1
Y Yang
0000002133
00002133
?
?
1
Y Yang
0000002134
00002134
?
?
1
Y Yang
0000002135
00002135
?
?
1
Y Yang
0000002136
00002136
?
?
1
Y Yang
0000002137
00002137
?
?
1
Y Yang
0000002138
00002138
?
?
1
Y Yang
0000002139
00002139
?
?
1
Y Yang
0000002140
00002140
?
?
1
Y Yang
0000002141
00002141
?
?
1
Y Yang
0000002142
00002142
?
?
1
Y Yang
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