NDDVD - Neurodegenerative Diseases Variation Database
NTRK1 (neurotrophic tyrosine kinase, receptor, type 1)
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Curator:
Y Yang
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View all diseases associated with gene NTRK1
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All screenings for gene NTRK1
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
Template
: Template(s) used to detect the sequence variant; DNA = genomic DNA, RNA = RNA (cDNA).
All options:
DNA
RNA = RNA (cDNA)
Protein
? = unknown
Technique
: Technique(s) used to identify the sequence variant.
All options:
? = Unknown
arrayCGH = array for Comparative Genomic Hybridisation
arraySEQ = array for resequencing
arraySNP = array for SNP typing
arrayCNV = array for Copy Number Variation (SNP and CNV probes)
BESS = Base Excision Sequence Scanning
CMC = Chemical Mismatch Cleavage
CSCE = Conformation Sensitive Capillary Electrophoresis
DGGE = Denaturing-Gradient Gel-Electrophoresis
DHPLC = Denaturing High-Performance Liquid Chromatography
DOVAM = Detection Of Virtually All Mutations (SSCA variant)
ddF = dideoxy Fingerprinting
DSCA = Double-Strand DNA Conformation Analysis
EMC = Enzymatic Mismatch Cleavage
HD = HeteroDuplex analysis
MCA = high-resolution Melting Curve Analysis (hrMCA)
IHC = Immuno-Histo-Chemistry
MAPH = Multiplex Amplifiable Probe Hybridisation
MLPA = Multiplex Ligation-dependent Probe Amplification
SEQ-NG = Next-Generation Sequencing
SEQ-NG-H = Next-Generation Sequencing - Helicos
SEQ-NG-I = Next-Generation Sequencing - Illumina/Solexa
SEQ-NG-R = Next-Generation Sequencing - Roche/454
SEQ-NG-S = Next-Generation Sequencing - SOLiD
Northern = Northern blotting
PCR = Polymerase Chain Reaction
PCRdig = PCR + restriction enzyme digestion
PCRlr = PCR, long-range
PCRm = PCR, multiplex
PCRq = PCR, quantitative
PAGE = Poly-Acrylamide Gel-Electrophoresis
PTT = Protein Truncation Test
PFGE = Pulsed-Field Gel-Electrophoresis (+Southern)
RT-PCR = Reverse Transcription and PCR
SEQ = SEQuencing
SBE = Single Base Extension
SSCA = Single-Strand DNA Conformation polymorphism Analysis (SSCP)
SSCAf = SSCA, fluorescent (SSCP)
Southern = Southern blotting
TaqMan = TaqMan assay
Western = Western Blotting
How to query this table
All list views have search fields which can be used to search data. You can search for a complete word or you can search for a part of a search term. If you enclose two or more words in double quotes, LOVD will search for the combination of those words only exactly in the order you specify. Note that search terms are case-insensitive and that wildcards such as * are treated as normal text! For all options, like "and", "or", and "not" searches, or searching for prefixes or suffixes, see the table below.
Operator
Column type
Example
Matches
Text
Arg
all entries containing 'Arg'
space
Text
Arg Ser
all entries containing 'Arg' and 'Ser'
|
Text
Arg|Ser
all entries containing 'Arg' or 'Ser'
!
Text
!fs
all entries not containing 'fs'
^
Text
^p.(Arg
all entries beginning with 'p.(Arg'
$
Text
Ser)$
all entries ending with 'Ser)'
=""
Text
=""
all entries with this field empty
=""
Text
="p.0"
all entries exactly matching 'p.0'
!=""
Text
!=""
all entries with this field not empty
!=""
Text
!="p.0"
all entries not exactly matching 'p.0?'
combination
Text
*|Ter !fs
all entries containing '*' or 'Ter' but not containing 'fs'
Date
2020
all entries matching the year 2020
|
Date
2020-03|2020-04
all entries matching March or April, 2020
!
Date
!2020-03
all entries not matching March, 2020
<
Date
<2020
all entries before the year 2020
<=
Date
<=2020-06
all entries in or before June, 2020
>
Date
>2020-06
all entries after June, 2020
>=
Date
>=2020-06-15
all entries on or after June 15th, 2020
combination
Date
2019|2020 <2020-03
all entries in 2019 or 2020, and before March, 2020
Numeric
23
all entries exactly matching 23
|
Numeric
23|24
all entries exactly matching 23 or 24
!
Numeric
!23
all entries not exactly matching 23
<
Numeric
<23
all entries lower than 23
<=
Numeric
<=23
all entries lower than, or equal to, 23
>
Numeric
>23
all entries higher than 23
>=
Numeric
>=23
all entries higher than, or equal to, 23
combination
Numeric
>=20 <30 !23
all entries with values from 20 to 29, but not equal to 23
Some more advanced examples:
Example
Matches
Asian
all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian
all entries containing 'Asian' but not containing 'Caucasian'
Asian|African !Caucasian
all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"
all entries containing 'South Asian', but not containing 'South East Asian'
To sort on a certain column, click on the column header or on the arrows. If that column is already selected to sort on, the sort order will be swapped. The column currently sorted on has a darker blue background color than the other columns. The up and down arrows next to the column name indicate the current sorting direction. When sorting on any field other than the default, LOVD will sort secondarily on the default sort column.
57 entries on 1 page. Showing entries 1 - 57.
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Legend
How to query
Screening ID
Individual ID
Template
Technique
Variants found
Owner
0000001656
00001656
?
?
1
Y Yang
0000001657
00001657
?
?
1
Y Yang
0000001658
00001658
?
?
1
Y Yang
0000001659
00001659
?
?
1
Y Yang
0000001660
00001660
?
?
1
Y Yang
0000001661
00001661
?
?
1
Y Yang
0000001662
00001662
?
?
1
Y Yang
0000001663
00001663
?
?
1
Y Yang
0000001664
00001664
?
?
1
Y Yang
0000001665
00001665
?
?
1
Y Yang
0000001666
00001666
?
?
1
Y Yang
0000001667
00001667
?
?
1
Y Yang
0000001668
00001668
?
?
1
Y Yang
0000001669
00001669
?
?
1
Y Yang
0000001670
00001670
?
?
1
Y Yang
0000001671
00001671
?
?
1
Y Yang
0000001672
00001672
?
?
1
Y Yang
0000001673
00001673
?
?
1
Y Yang
0000001674
00001674
?
?
1
Y Yang
0000001675
00001675
?
?
1
Y Yang
0000001676
00001676
?
?
1
Y Yang
0000001677
00001677
?
?
1
Y Yang
0000001678
00001678
?
?
1
Y Yang
0000001679
00001679
?
?
1
Y Yang
0000001680
00001680
?
?
1
Y Yang
0000001681
00001681
?
?
1
Y Yang
0000001682
00001682
?
?
1
Y Yang
0000001683
00001683
?
?
1
Y Yang
0000001684
00001684
?
?
1
Y Yang
0000001685
00001685
?
?
1
Y Yang
0000001686
00001686
?
?
1
Y Yang
0000001687
00001687
?
?
1
Y Yang
0000001688
00001688
?
?
1
Y Yang
0000001689
00001689
?
?
1
Y Yang
0000001690
00001690
?
?
1
Y Yang
0000001691
00001691
?
?
1
Y Yang
0000001692
00001692
?
?
1
Y Yang
0000001693
00001693
?
?
1
Y Yang
0000001694
00001694
?
?
1
Y Yang
0000001695
00001695
?
?
1
Y Yang
0000001696
00001696
?
?
1
Y Yang
0000001697
00001697
?
?
1
Y Yang
0000001698
00001698
?
?
1
Y Yang
0000001699
00001699
?
?
1
Y Yang
0000001700
00001700
?
?
1
Y Yang
0000001701
00001701
?
?
1
Y Yang
0000001702
00001702
?
?
1
Y Yang
0000001703
00001703
?
?
1
Y Yang
0000001704
00001704
?
?
1
Y Yang
0000005601
00005589
?
?
1
XY Liu
0000005602
00005590
?
?
1
XY Liu
0000005603
00005591
?
?
1
XY Liu
0000005604
00005592
?
?
1
XY Liu
0000005605
00005593
?
?
1
XY Liu
0000005606
00005594
?
?
1
XY Liu
0000005607
00005595
?
?
1
XY Liu
0000005609
00005597
?
?
1
XY Liu
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