NDDVD - Neurodegenerative Diseases Variation Database
PLP1 (proteolipid protein 1)
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Curator:
Y Yang
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View PLP1 gene homepage
View graphs about the PLP1 gene database
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View all transcripts
View all transcripts of gene PLP1
Create a new transcript information entry
View all variants
View all variants affecting transcripts
View unique variants in gene PLP1
View all variants in gene PLP1
Full data view for gene PLP1
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View active genomic custom columns
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View all individuals
View all individuals with variants in gene PLP1
Create a new data submission
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View all diseases
View all diseases associated with gene PLP1
Create a new disease information entry
View available phenotype columns
View all screenings
View all screenings for gene PLP1
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View active custom columns
Enable more custom columns
Submit new data
All screenings for gene PLP1
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
Template
: Template(s) used to detect the sequence variant; DNA = genomic DNA, RNA = RNA (cDNA).
All options:
DNA
RNA = RNA (cDNA)
Protein
? = unknown
Technique
: Technique(s) used to identify the sequence variant.
All options:
? = Unknown
arrayCGH = array for Comparative Genomic Hybridisation
arraySEQ = array for resequencing
arraySNP = array for SNP typing
arrayCNV = array for Copy Number Variation (SNP and CNV probes)
BESS = Base Excision Sequence Scanning
CMC = Chemical Mismatch Cleavage
CSCE = Conformation Sensitive Capillary Electrophoresis
DGGE = Denaturing-Gradient Gel-Electrophoresis
DHPLC = Denaturing High-Performance Liquid Chromatography
DOVAM = Detection Of Virtually All Mutations (SSCA variant)
ddF = dideoxy Fingerprinting
DSCA = Double-Strand DNA Conformation Analysis
EMC = Enzymatic Mismatch Cleavage
HD = HeteroDuplex analysis
MCA = high-resolution Melting Curve Analysis (hrMCA)
IHC = Immuno-Histo-Chemistry
MAPH = Multiplex Amplifiable Probe Hybridisation
MLPA = Multiplex Ligation-dependent Probe Amplification
SEQ-NG = Next-Generation Sequencing
SEQ-NG-H = Next-Generation Sequencing - Helicos
SEQ-NG-I = Next-Generation Sequencing - Illumina/Solexa
SEQ-NG-R = Next-Generation Sequencing - Roche/454
SEQ-NG-S = Next-Generation Sequencing - SOLiD
Northern = Northern blotting
PCR = Polymerase Chain Reaction
PCRdig = PCR + restriction enzyme digestion
PCRlr = PCR, long-range
PCRm = PCR, multiplex
PCRq = PCR, quantitative
PAGE = Poly-Acrylamide Gel-Electrophoresis
PTT = Protein Truncation Test
PFGE = Pulsed-Field Gel-Electrophoresis (+Southern)
RT-PCR = Reverse Transcription and PCR
SEQ = SEQuencing
SBE = Single Base Extension
SSCA = Single-Strand DNA Conformation polymorphism Analysis (SSCP)
SSCAf = SSCA, fluorescent (SSCP)
Southern = Southern blotting
TaqMan = TaqMan assay
Western = Western Blotting
How to query this table
All list views have search fields which can be used to search data. You can search for a complete word or you can search for a part of a search term. If you enclose two or more words in double quotes, LOVD will search for the combination of those words only exactly in the order you specify. Note that search terms are case-insensitive and that wildcards such as * are treated as normal text! For all options, like "and", "or", and "not" searches, or searching for prefixes or suffixes, see the table below.
Operator
Column type
Example
Matches
Text
Arg
all entries containing 'Arg'
space
Text
Arg Ser
all entries containing 'Arg' and 'Ser'
|
Text
Arg|Ser
all entries containing 'Arg' or 'Ser'
!
Text
!fs
all entries not containing 'fs'
^
Text
^p.(Arg
all entries beginning with 'p.(Arg'
$
Text
Ser)$
all entries ending with 'Ser)'
=""
Text
=""
all entries with this field empty
=""
Text
="p.0"
all entries exactly matching 'p.0'
!=""
Text
!=""
all entries with this field not empty
!=""
Text
!="p.0"
all entries not exactly matching 'p.0?'
combination
Text
*|Ter !fs
all entries containing '*' or 'Ter' but not containing 'fs'
Date
2020
all entries matching the year 2020
|
Date
2020-03|2020-04
all entries matching March or April, 2020
!
Date
!2020-03
all entries not matching March, 2020
<
Date
<2020
all entries before the year 2020
<=
Date
<=2020-06
all entries in or before June, 2020
>
Date
>2020-06
all entries after June, 2020
>=
Date
>=2020-06-15
all entries on or after June 15th, 2020
combination
Date
2019|2020 <2020-03
all entries in 2019 or 2020, and before March, 2020
Numeric
23
all entries exactly matching 23
|
Numeric
23|24
all entries exactly matching 23 or 24
!
Numeric
!23
all entries not exactly matching 23
<
Numeric
<23
all entries lower than 23
<=
Numeric
<=23
all entries lower than, or equal to, 23
>
Numeric
>23
all entries higher than 23
>=
Numeric
>=23
all entries higher than, or equal to, 23
combination
Numeric
>=20 <30 !23
all entries with values from 20 to 29, but not equal to 23
Some more advanced examples:
Example
Matches
Asian
all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian
all entries containing 'Asian' but not containing 'Caucasian'
Asian|African !Caucasian
all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"
all entries containing 'South Asian', but not containing 'South East Asian'
To sort on a certain column, click on the column header or on the arrows. If that column is already selected to sort on, the sort order will be swapped. The column currently sorted on has a darker blue background color than the other columns. The up and down arrows next to the column name indicate the current sorting direction. When sorting on any field other than the default, LOVD will sort secondarily on the default sort column.
96 entries on 1 page. Showing entries 1 - 96.
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Legend
How to query
Screening ID
Individual ID
Template
Technique
Variants found
Owner
0000003836
00003836
?
?
1
Y Yang
0000003837
00003837
?
?
1
Y Yang
0000003838
00003838
?
?
1
Y Yang
0000003839
00003839
?
?
1
Y Yang
0000003840
00003840
?
?
1
Y Yang
0000003841
00003841
?
?
1
Y Yang
0000003842
00003842
?
?
1
Y Yang
0000003843
00003843
?
?
1
Y Yang
0000003844
00003844
?
?
1
Y Yang
0000003845
00003845
?
?
1
Y Yang
0000003846
00003846
?
?
1
Y Yang
0000003847
00003847
?
?
1
Y Yang
0000003848
00003848
?
?
1
Y Yang
0000003849
00003849
?
?
1
Y Yang
0000003850
00003850
?
?
1
Y Yang
0000003851
00003851
?
?
1
Y Yang
0000003852
00003852
?
?
1
Y Yang
0000003853
00003853
?
?
1
Y Yang
0000003854
00003854
?
?
1
Y Yang
0000003855
00003855
?
?
1
Y Yang
0000003856
00003856
?
?
1
Y Yang
0000003857
00003857
?
?
1
Y Yang
0000003858
00003858
?
?
1
Y Yang
0000003859
00003859
?
?
1
Y Yang
0000003860
00003860
?
?
1
Y Yang
0000003861
00003861
?
?
1
Y Yang
0000003862
00003862
?
?
1
Y Yang
0000003863
00003863
?
?
1
Y Yang
0000003864
00003864
?
?
1
Y Yang
0000003865
00003865
?
?
1
Y Yang
0000003866
00003866
?
?
1
Y Yang
0000003867
00003867
?
?
1
Y Yang
0000003868
00003868
?
?
1
Y Yang
0000003869
00003869
?
?
1
Y Yang
0000003870
00003870
?
?
1
Y Yang
0000003871
00003871
?
?
1
Y Yang
0000003872
00003872
?
?
1
Y Yang
0000003873
00003873
?
?
1
Y Yang
0000003874
00003874
?
?
1
Y Yang
0000003875
00003875
?
?
1
Y Yang
0000003876
00003876
?
?
1
Y Yang
0000003877
00003877
?
?
1
Y Yang
0000003878
00003878
?
?
1
Y Yang
0000003879
00003879
?
?
1
Y Yang
0000003880
00003880
?
?
1
Y Yang
0000003881
00003881
?
?
1
Y Yang
0000003882
00003882
?
?
1
Y Yang
0000003883
00003883
?
?
1
Y Yang
0000003884
00003884
?
?
1
Y Yang
0000003885
00003885
?
?
1
Y Yang
0000003886
00003886
?
?
1
Y Yang
0000003887
00003887
?
?
1
Y Yang
0000003888
00003888
?
?
1
Y Yang
0000003889
00003889
?
?
1
Y Yang
0000003890
00003890
?
?
1
Y Yang
0000003891
00003891
?
?
1
Y Yang
0000003892
00003892
?
?
1
Y Yang
0000003893
00003893
?
?
1
Y Yang
0000003894
00003894
?
?
1
Y Yang
0000003895
00003895
?
?
1
Y Yang
0000003896
00003896
?
?
1
Y Yang
0000003897
00003897
?
?
1
Y Yang
0000003898
00003898
?
?
1
Y Yang
0000003899
00003899
?
?
1
Y Yang
0000003900
00003900
?
?
1
Y Yang
0000003901
00003901
?
?
1
Y Yang
0000003902
00003902
?
?
1
Y Yang
0000003903
00003903
?
?
1
Y Yang
0000003904
00003904
?
?
1
Y Yang
0000003905
00003905
?
?
1
Y Yang
0000003906
00003906
?
?
1
Y Yang
0000003907
00003907
?
?
1
Y Yang
0000003908
00003908
?
?
1
Y Yang
0000003909
00003909
?
?
1
Y Yang
0000003910
00003910
?
?
1
Y Yang
0000003911
00003911
?
?
1
Y Yang
0000003912
00003912
?
?
1
Y Yang
0000003913
00003913
?
?
1
Y Yang
0000003914
00003914
?
?
1
Y Yang
0000003915
00003915
?
?
1
Y Yang
0000003916
00003916
?
?
1
Y Yang
0000003917
00003917
?
?
1
Y Yang
0000003918
00003918
?
?
1
Y Yang
0000003919
00003919
?
?
1
Y Yang
0000003920
00003920
?
?
1
Y Yang
0000003921
00003921
?
?
1
Y Yang
0000003922
00003922
?
?
1
Y Yang
0000003923
00003923
?
?
1
Y Yang
0000003924
00003924
?
?
1
Y Yang
0000003925
00003925
?
?
1
Y Yang
0000003926
00003926
?
?
1
Y Yang
0000003927
00003927
?
?
1
Y Yang
0000003928
00003928
?
?
1
Y Yang
0000005835
00005819
?
?
1
XY Liu
0000005836
00005820
?
?
1
XY Liu
0000005837
00005821
?
?
1
XY Liu
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Legend
How to query
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