NDDVD - Neurodegenerative Diseases Variation Database
TPP1 (tripeptidyl peptidase I)
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Curator:
Y Yang
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View all transcripts of gene TPP1
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View all variants affecting transcripts
View unique variants in gene TPP1
View all variants in gene TPP1
Full data view for gene TPP1
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View all individuals with variants in gene TPP1
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View all diseases associated with gene TPP1
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View available phenotype columns
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View all screenings for gene TPP1
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All screenings for gene TPP1
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
Template
: Template(s) used to detect the sequence variant; DNA = genomic DNA, RNA = RNA (cDNA).
All options:
DNA
RNA = RNA (cDNA)
Protein
? = unknown
Technique
: Technique(s) used to identify the sequence variant.
All options:
? = Unknown
arrayCGH = array for Comparative Genomic Hybridisation
arraySEQ = array for resequencing
arraySNP = array for SNP typing
arrayCNV = array for Copy Number Variation (SNP and CNV probes)
BESS = Base Excision Sequence Scanning
CMC = Chemical Mismatch Cleavage
CSCE = Conformation Sensitive Capillary Electrophoresis
DGGE = Denaturing-Gradient Gel-Electrophoresis
DHPLC = Denaturing High-Performance Liquid Chromatography
DOVAM = Detection Of Virtually All Mutations (SSCA variant)
ddF = dideoxy Fingerprinting
DSCA = Double-Strand DNA Conformation Analysis
EMC = Enzymatic Mismatch Cleavage
HD = HeteroDuplex analysis
MCA = high-resolution Melting Curve Analysis (hrMCA)
IHC = Immuno-Histo-Chemistry
MAPH = Multiplex Amplifiable Probe Hybridisation
MLPA = Multiplex Ligation-dependent Probe Amplification
SEQ-NG = Next-Generation Sequencing
SEQ-NG-H = Next-Generation Sequencing - Helicos
SEQ-NG-I = Next-Generation Sequencing - Illumina/Solexa
SEQ-NG-R = Next-Generation Sequencing - Roche/454
SEQ-NG-S = Next-Generation Sequencing - SOLiD
Northern = Northern blotting
PCR = Polymerase Chain Reaction
PCRdig = PCR + restriction enzyme digestion
PCRlr = PCR, long-range
PCRm = PCR, multiplex
PCRq = PCR, quantitative
PAGE = Poly-Acrylamide Gel-Electrophoresis
PTT = Protein Truncation Test
PFGE = Pulsed-Field Gel-Electrophoresis (+Southern)
RT-PCR = Reverse Transcription and PCR
SEQ = SEQuencing
SBE = Single Base Extension
SSCA = Single-Strand DNA Conformation polymorphism Analysis (SSCP)
SSCAf = SSCA, fluorescent (SSCP)
Southern = Southern blotting
TaqMan = TaqMan assay
Western = Western Blotting
How to query this table
All list views have search fields which can be used to search data. You can search for a complete word or you can search for a part of a search term. If you enclose two or more words in double quotes, LOVD will search for the combination of those words only exactly in the order you specify. Note that search terms are case-insensitive and that wildcards such as * are treated as normal text! For all options, like "and", "or", and "not" searches, or searching for prefixes or suffixes, see the table below.
Operator
Column type
Example
Matches
Text
Arg
all entries containing 'Arg'
space
Text
Arg Ser
all entries containing 'Arg' and 'Ser'
|
Text
Arg|Ser
all entries containing 'Arg' or 'Ser'
!
Text
!fs
all entries not containing 'fs'
^
Text
^p.(Arg
all entries beginning with 'p.(Arg'
$
Text
Ser)$
all entries ending with 'Ser)'
=""
Text
=""
all entries with this field empty
=""
Text
="p.0"
all entries exactly matching 'p.0'
!=""
Text
!=""
all entries with this field not empty
!=""
Text
!="p.0"
all entries not exactly matching 'p.0?'
combination
Text
*|Ter !fs
all entries containing '*' or 'Ter' but not containing 'fs'
Date
2020
all entries matching the year 2020
|
Date
2020-03|2020-04
all entries matching March or April, 2020
!
Date
!2020-03
all entries not matching March, 2020
<
Date
<2020
all entries before the year 2020
<=
Date
<=2020-06
all entries in or before June, 2020
>
Date
>2020-06
all entries after June, 2020
>=
Date
>=2020-06-15
all entries on or after June 15th, 2020
combination
Date
2019|2020 <2020-03
all entries in 2019 or 2020, and before March, 2020
Numeric
23
all entries exactly matching 23
|
Numeric
23|24
all entries exactly matching 23 or 24
!
Numeric
!23
all entries not exactly matching 23
<
Numeric
<23
all entries lower than 23
<=
Numeric
<=23
all entries lower than, or equal to, 23
>
Numeric
>23
all entries higher than 23
>=
Numeric
>=23
all entries higher than, or equal to, 23
combination
Numeric
>=20 <30 !23
all entries with values from 20 to 29, but not equal to 23
Some more advanced examples:
Example
Matches
Asian
all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian
all entries containing 'Asian' but not containing 'Caucasian'
Asian|African !Caucasian
all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"
all entries containing 'South Asian', but not containing 'South East Asian'
To sort on a certain column, click on the column header or on the arrows. If that column is already selected to sort on, the sort order will be swapped. The column currently sorted on has a darker blue background color than the other columns. The up and down arrows next to the column name indicate the current sorting direction. When sorting on any field other than the default, LOVD will sort secondarily on the default sort column.
95 entries on 1 page. Showing entries 1 - 95.
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Legend
How to query
Screening ID
Individual ID
Template
Technique
Variants found
Owner
0000002627
00002627
?
?
1
Y Yang
0000002628
00002628
?
?
1
Y Yang
0000002629
00002629
?
?
1
Y Yang
0000002630
00002630
?
?
1
Y Yang
0000002631
00002631
?
?
1
Y Yang
0000002632
00002632
?
?
1
Y Yang
0000002633
00002633
?
?
1
Y Yang
0000002634
00002634
?
?
1
Y Yang
0000002635
00002635
?
?
1
Y Yang
0000002636
00002636
?
?
1
Y Yang
0000002637
00002637
?
?
1
Y Yang
0000002638
00002638
?
?
1
Y Yang
0000002639
00002639
?
?
1
Y Yang
0000002640
00002640
?
?
1
Y Yang
0000002641
00002641
?
?
1
Y Yang
0000002642
00002642
?
?
1
Y Yang
0000002643
00002643
?
?
1
Y Yang
0000002644
00002644
?
?
1
Y Yang
0000002645
00002645
?
?
1
Y Yang
0000002646
00002646
?
?
1
Y Yang
0000002647
00002647
?
?
1
Y Yang
0000002648
00002648
?
?
1
Y Yang
0000002649
00002649
?
?
1
Y Yang
0000002650
00002650
?
?
1
Y Yang
0000002651
00002651
?
?
1
Y Yang
0000002652
00002652
?
?
1
Y Yang
0000002653
00002653
?
?
1
Y Yang
0000002654
00002654
?
?
1
Y Yang
0000002655
00002655
?
?
1
Y Yang
0000002656
00002656
?
?
1
Y Yang
0000002657
00002657
?
?
1
Y Yang
0000002658
00002658
?
?
1
Y Yang
0000002659
00002659
?
?
1
Y Yang
0000002660
00002660
?
?
1
Y Yang
0000002661
00002661
?
?
1
Y Yang
0000002662
00002662
?
?
1
Y Yang
0000002663
00002663
?
?
1
Y Yang
0000002664
00002664
?
?
1
Y Yang
0000002665
00002665
?
?
1
Y Yang
0000002666
00002666
?
?
1
Y Yang
0000002667
00002667
?
?
1
Y Yang
0000002668
00002668
?
?
1
Y Yang
0000002669
00002669
?
?
1
Y Yang
0000002670
00002670
?
?
1
Y Yang
0000002671
00002671
?
?
1
Y Yang
0000002672
00002672
?
?
1
Y Yang
0000002673
00002673
?
?
1
Y Yang
0000002674
00002674
?
?
1
Y Yang
0000002675
00002675
?
?
1
Y Yang
0000002676
00002676
?
?
1
Y Yang
0000002677
00002677
?
?
1
Y Yang
0000002678
00002678
?
?
1
Y Yang
0000002679
00002679
?
?
1
Y Yang
0000002680
00002680
?
?
1
Y Yang
0000002681
00002681
?
?
1
Y Yang
0000002682
00002682
?
?
1
Y Yang
0000002683
00002683
?
?
1
Y Yang
0000002684
00002684
?
?
1
Y Yang
0000002685
00002685
?
?
1
Y Yang
0000002686
00002686
?
?
1
Y Yang
0000002687
00002687
?
?
1
Y Yang
0000002688
00002688
?
?
1
Y Yang
0000002689
00002689
?
?
1
Y Yang
0000002690
00002690
?
?
1
Y Yang
0000002691
00002691
?
?
1
Y Yang
0000002692
00002692
?
?
1
Y Yang
0000002693
00002693
?
?
1
Y Yang
0000002694
00002694
?
?
1
Y Yang
0000002695
00002695
?
?
1
Y Yang
0000002860
00002860
?
?
1
Y Yang
0000002861
00002861
?
?
1
Y Yang
0000002862
00002862
?
?
1
Y Yang
0000002863
00002863
?
?
1
Y Yang
0000002864
00002864
?
?
1
Y Yang
0000002865
00002865
?
?
1
Y Yang
0000002866
00002866
?
?
1
Y Yang
0000002867
00002867
?
?
1
Y Yang
0000002868
00002868
?
?
1
Y Yang
0000002869
00002869
?
?
1
Y Yang
0000002870
00002870
?
?
1
Y Yang
0000002871
00002871
?
?
1
Y Yang
0000002872
00002872
?
?
1
Y Yang
0000002873
00002873
?
?
1
Y Yang
0000002874
00002874
?
?
1
Y Yang
0000002875
00002875
?
?
1
Y Yang
0000002876
00002876
?
?
1
Y Yang
0000002877
00002877
?
?
1
Y Yang
0000002878
00002878
?
?
1
Y Yang
0000002879
00002879
?
?
1
Y Yang
0000002880
00002880
?
?
1
Y Yang
0000002881
00002881
?
?
1
Y Yang
0000002882
00002882
?
?
1
Y Yang
0000005729
00005713
?
?
1
XY Liu
0000005730
00005714
?
?
1
XY Liu
0000005734
00005718
?
?
1
XY Liu
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How to query
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