NDDVD - Neurodegenerative Diseases Variation Database
GFAP (glial fibrillary acidic protein)
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Curator:
Y Yang
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View all transcripts of gene GFAP
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View all variants affecting transcripts
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View all individuals with variants in gene GFAP
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View all diseases associated with gene GFAP
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All screenings for gene GFAP
Legend
Please note that a short description of a certain column can be displayed when you move your mouse cursor over the column's header and hold it still. Below, a more detailed description is shown per column.
Template
: Template(s) used to detect the sequence variant; DNA = genomic DNA, RNA = RNA (cDNA).
All options:
DNA
RNA = RNA (cDNA)
Protein
? = unknown
Technique
: Technique(s) used to identify the sequence variant.
All options:
? = Unknown
arrayCGH = array for Comparative Genomic Hybridisation
arraySEQ = array for resequencing
arraySNP = array for SNP typing
arrayCNV = array for Copy Number Variation (SNP and CNV probes)
BESS = Base Excision Sequence Scanning
CMC = Chemical Mismatch Cleavage
CSCE = Conformation Sensitive Capillary Electrophoresis
DGGE = Denaturing-Gradient Gel-Electrophoresis
DHPLC = Denaturing High-Performance Liquid Chromatography
DOVAM = Detection Of Virtually All Mutations (SSCA variant)
ddF = dideoxy Fingerprinting
DSCA = Double-Strand DNA Conformation Analysis
EMC = Enzymatic Mismatch Cleavage
HD = HeteroDuplex analysis
MCA = high-resolution Melting Curve Analysis (hrMCA)
IHC = Immuno-Histo-Chemistry
MAPH = Multiplex Amplifiable Probe Hybridisation
MLPA = Multiplex Ligation-dependent Probe Amplification
SEQ-NG = Next-Generation Sequencing
SEQ-NG-H = Next-Generation Sequencing - Helicos
SEQ-NG-I = Next-Generation Sequencing - Illumina/Solexa
SEQ-NG-R = Next-Generation Sequencing - Roche/454
SEQ-NG-S = Next-Generation Sequencing - SOLiD
Northern = Northern blotting
PCR = Polymerase Chain Reaction
PCRdig = PCR + restriction enzyme digestion
PCRlr = PCR, long-range
PCRm = PCR, multiplex
PCRq = PCR, quantitative
PAGE = Poly-Acrylamide Gel-Electrophoresis
PTT = Protein Truncation Test
PFGE = Pulsed-Field Gel-Electrophoresis (+Southern)
RT-PCR = Reverse Transcription and PCR
SEQ = SEQuencing
SBE = Single Base Extension
SSCA = Single-Strand DNA Conformation polymorphism Analysis (SSCP)
SSCAf = SSCA, fluorescent (SSCP)
Southern = Southern blotting
TaqMan = TaqMan assay
Western = Western Blotting
How to query this table
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Operator
Column type
Example
Matches
Text
Arg
all entries containing 'Arg'
space
Text
Arg Ser
all entries containing 'Arg' and 'Ser'
|
Text
Arg|Ser
all entries containing 'Arg' or 'Ser'
!
Text
!fs
all entries not containing 'fs'
^
Text
^p.(Arg
all entries beginning with 'p.(Arg'
$
Text
Ser)$
all entries ending with 'Ser)'
=""
Text
=""
all entries with this field empty
=""
Text
="p.0"
all entries exactly matching 'p.0'
!=""
Text
!=""
all entries with this field not empty
!=""
Text
!="p.0"
all entries not exactly matching 'p.0?'
combination
Text
*|Ter !fs
all entries containing '*' or 'Ter' but not containing 'fs'
Date
2020
all entries matching the year 2020
|
Date
2020-03|2020-04
all entries matching March or April, 2020
!
Date
!2020-03
all entries not matching March, 2020
<
Date
<2020
all entries before the year 2020
<=
Date
<=2020-06
all entries in or before June, 2020
>
Date
>2020-06
all entries after June, 2020
>=
Date
>=2020-06-15
all entries on or after June 15th, 2020
combination
Date
2019|2020 <2020-03
all entries in 2019 or 2020, and before March, 2020
Numeric
23
all entries exactly matching 23
|
Numeric
23|24
all entries exactly matching 23 or 24
!
Numeric
!23
all entries not exactly matching 23
<
Numeric
<23
all entries lower than 23
<=
Numeric
<=23
all entries lower than, or equal to, 23
>
Numeric
>23
all entries higher than 23
>=
Numeric
>=23
all entries higher than, or equal to, 23
combination
Numeric
>=20 <30 !23
all entries with values from 20 to 29, but not equal to 23
Some more advanced examples:
Example
Matches
Asian
all entries containing 'Asian', 'asian', including 'Caucasian', 'caucasian', etc.
Asian !Caucasian
all entries containing 'Asian' but not containing 'Caucasian'
Asian|African !Caucasian
all entries containing 'Asian' or 'African', but not containing 'Caucasian'
"South Asian"
all entries containing 'South Asian', but not containing 'South East Asian'
To sort on a certain column, click on the column header or on the arrows. If that column is already selected to sort on, the sort order will be swapped. The column currently sorted on has a darker blue background color than the other columns. The up and down arrows next to the column name indicate the current sorting direction. When sorting on any field other than the default, LOVD will sort secondarily on the default sort column.
142 entries on 2 pages. Showing entries 1 - 100.
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Legend
How to query
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Screening ID
Individual ID
Template
Technique
Variants found
Owner
0000000001
00000001
?
?
1
Y Yang
0000000003
00000003
?
?
1
Y Yang
0000000004
00000004
?
?
1
Y Yang
0000000005
00000005
?
?
1
Y Yang
0000000006
00000006
?
?
1
Y Yang
0000000007
00000007
?
?
1
Y Yang
0000000008
00000008
?
?
1
Y Yang
0000000009
00000009
?
?
1
Y Yang
0000000010
00000010
?
?
1
Y Yang
0000000011
00000011
?
?
1
Y Yang
0000000012
00000012
?
?
1
Y Yang
0000000013
00000013
?
?
1
Y Yang
0000000014
00000014
?
?
1
Y Yang
0000000015
00000015
?
?
1
Y Yang
0000000016
00000016
?
?
1
Y Yang
0000000017
00000017
?
?
1
Y Yang
0000000018
00000018
?
?
1
Y Yang
0000000019
00000019
?
?
1
Y Yang
0000000020
00000020
?
?
1
Y Yang
0000000021
00000021
?
?
1
Y Yang
0000000022
00000022
?
?
1
Y Yang
0000000023
00000023
?
?
1
Y Yang
0000000024
00000024
?
?
1
Y Yang
0000000025
00000025
?
?
1
Y Yang
0000000026
00000026
?
?
1
Y Yang
0000000027
00000027
?
?
1
Y Yang
0000000028
00000028
?
?
1
Y Yang
0000000029
00000029
?
?
1
Y Yang
0000000030
00000030
?
?
1
Y Yang
0000000031
00000031
?
?
1
Y Yang
0000000032
00000032
?
?
1
Y Yang
0000000033
00000033
?
?
1
Y Yang
0000000034
00000034
?
?
1
Y Yang
0000000035
00000035
?
?
1
Y Yang
0000000037
00000037
?
?
1
Y Yang
0000000038
00000038
?
?
1
Y Yang
0000000039
00000039
?
?
1
Y Yang
0000000040
00000040
?
?
1
Y Yang
0000000041
00000041
?
?
1
Y Yang
0000000042
00000042
?
?
1
Y Yang
0000000043
00000043
?
?
1
Y Yang
0000000044
00000044
?
?
1
Y Yang
0000000045
00000045
?
?
1
Y Yang
0000000046
00000046
?
?
1
Y Yang
0000000047
00000047
?
?
1
Y Yang
0000000048
00000048
?
?
1
Y Yang
0000000049
00000049
?
?
1
Y Yang
0000000050
00000050
?
?
1
Y Yang
0000000053
00000053
?
?
1
Y Yang
0000000054
00000054
?
?
1
Y Yang
0000000055
00000055
?
?
1
Y Yang
0000000057
00000057
?
?
1
Y Yang
0000000058
00000058
?
?
1
Y Yang
0000000059
00000059
?
?
1
Y Yang
0000000060
00000060
?
?
1
Y Yang
0000000061
00000061
?
?
1
Y Yang
0000000062
00000062
?
?
1
Y Yang
0000000063
00000063
?
?
1
Y Yang
0000000064
00000064
?
?
1
Y Yang
0000000065
00000065
?
?
1
Y Yang
0000000066
00000066
?
?
1
Y Yang
0000000067
00000067
?
?
1
Y Yang
0000000068
00000068
?
?
1
Y Yang
0000000069
00000069
?
?
1
Y Yang
0000000070
00000070
?
?
1
Y Yang
0000000071
00000071
?
?
1
Y Yang
0000000072
00000072
?
?
1
Y Yang
0000000073
00000073
?
?
1
Y Yang
0000000074
00000074
?
?
1
Y Yang
0000000075
00000075
?
?
1
Y Yang
0000000076
00000076
?
?
1
Y Yang
0000000077
00000077
?
?
1
Y Yang
0000000078
00000078
?
?
1
Y Yang
0000000079
00000079
?
?
1
Y Yang
0000000080
00000080
?
?
1
Y Yang
0000000081
00000081
?
?
1
Y Yang
0000000082
00000082
?
?
1
Y Yang
0000000084
00000084
?
?
1
Y Yang
0000000085
00000085
?
?
1
Y Yang
0000000086
00000086
?
?
1
Y Yang
0000000087
00000087
?
?
1
Y Yang
0000000088
00000088
?
?
1
Y Yang
0000000089
00000089
?
?
1
Y Yang
0000000090
00000090
?
?
1
Y Yang
0000000091
00000091
?
?
1
Y Yang
0000001435
00001435
?
?
1
Y Yang
0000004758
00004758
?
?
1
XY Liu
0000004759
00004759
?
?
1
XY Liu
0000004760
00004760
?
?
1
XY Liu
0000004761
00004761
?
?
1
XY Liu
0000004762
00004762
?
?
1
XY Liu
0000004763
00004763
?
?
1
XY Liu
0000004764
00004764
?
?
1
XY Liu
0000004765
00004765
?
?
1
XY Liu
0000004766
00004766
?
?
1
XY Liu
0000004767
00004767
?
?
1
XY Liu
0000006149
00006127
DNA
?
1
XY Liu
0000006150
00006128
?
?
1
XY Liu
0000006151
00006129
?
?
1
XY Liu
0000006152
00006130
?
?
1
XY Liu
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